Yes, you can absolutely go to Kyoto using the Japan Rail (JR) Pass, and it is one of the most popular ways to reach the city. From Tokyo, you would take the Tokaido Shinkansen (bullet train) directly to Kyoto Station, a journey of about 2 to 2.5 hours. It is important to remember that while the pass covers the "Hikari" and "Kodama" trains, it does not cover the "Nozomi" or "Mizuho" trains unless you purchase a special supplemental ticket. Once you are in Kyoto, your JR Pass can also be used on local JR lines, such as the JR Nara Line (for Fushimi Inari Shrine) and the JR Sagano Line (for Arashiyama). However, the pass will not work on the Kyoto City Subway lines or the extensive private bus network that many tourists use to get around the city. Because much of Kyoto's most famous sites are accessed via non-JR transport, you will likely need to supplement your JR Pass with an IC card (like Suica or Pasmo) for local city travel, but for the major journey into and out of the city, the JR Pass is highly efficient.